The Insight Journal is an Open Access on-line publication covering the domain of medical image processing and visualization.

The unique characteristics of the Insight Journal include:

- Open-access to articles, data, code, and reviews
- Open peer-review that invites discussion between reviewers and authors
- Emphasis on reproducible science via automated code compilation and testing
- Support for continuous revision of articles, code, and reviews


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Computational Geometry Computation and KNN Segmentation in ITK
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This work describes the implementation of computational geometry algorithms developed within the Insight Toolkit (ITK): Distance Transform (DT), Voronoi diagrams, k Nearest Neighbor (kNN) transform, and finally a K Nearest Neighbor classifier for multichannel [...]

Cumulative Gaussian Curve Fitter for Boundary Parameterization
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We have previously developed an algorithm for locating boundaries in an image with sub-pixel resolution, as well as estimating boundary width and image intensity within the adjoining objects. The algorithm operates by finding the parameters of a cumulative [...]

ITK Neural Networks IO Classes
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Classes to provide IO capabilities for the ITK Neural Networks library.

itkConnectedComponentFunctorImageFilter
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itkConnectedComponentFunctorImageFilter is a generic connected components filter that operates on any N-dimensional image type with the "functor" defining what mechanism to use to join two neighboring pixels

MINC2.0 IO Support for ITK
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MINC2.0 IO support REVISED! This revision has direction cosines and various other issues addressed.

ITK Order K Distance Transform
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We have implemented an Order K Distance Transform filter. The Order K distance transform computes the distances to the k nearest foreground pixels. Additionally the Order K Voronoi diagram can be computed. This work was supported in part by R21 MH67054, NSF [...]

Tetrahedral mesh generation for medical imaging
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We describe the open source implementation of an adaptive tetrahedral mesh generator particularly targeted for non-rigid FEM registration of MR images. While many medical imaging applications require robust mesh generation, there are few codes available. [...]

Incorporating Metric Flows and Sparse Jacobian Transformations in ITK
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Various metrics have been proposed in the literature for performing intrinsic automatic image to image registration. Among these measures, mutual information is a very popular one because of its robustness and accuracy for a wide variety of applications. In [...]

optimized image iterators
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This document describes the iteration direction optimized Image Iterators . Comparing with the original corresponding iterators, the new iterators provide automatic iteration direction optimization and give more flexible. They are more efficient when the [...]

Model-Image Registration of Parametric Shape Models: Fitting a Shell to the Cochlea
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Mathematical models are often used to describe natural phenomena, organisms and anatomy. This paper presents a Model-Image Registration framework that can be used to evaluate models of anatomical shape. An optimisation process is applied to the model [...]

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2020 January-December
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Most Recent Reviews
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Worked very well and was easy to build
A Skull-Stripping Filter for ITK
by Jared Becksfort on 2017-09-19 16:03:36
Very interesting work
Isotropic and Steerable Wavelets in N...
by Le Zheng on 2017-06-02 11:07:04
Valuable contribution
A new implementation of...
by Dženan Zukić on 2016-07-28 15:40:50
Simple interface
A Skull-Stripping Filter for ITK
by Todd Jensen on 2016-05-30 08:00:15
A useful function, but with some build...
Walk In A Triangulation : Straight Walk
by Davis Vigneault on 2015-06-09 09:57:49
A meaningful contribution with...
Exact Geometrical Predicate: Point in...
by Davis Vigneault on 2015-06-09 11:10:14
Useful tool for kinetic analysis of PET...
InsightToolkit Kinetic Analysis...
by Matthew Mccormick on 2014-11-21 18:34:13
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