The Insight Journal is an Open Access on-line publication covering the domain of medical image processing and visualization.

The unique characteristics of the Insight Journal include:

- Open-access to articles, data, code, and reviews
- Open peer-review that invites discussion between reviewers and authors
- Emphasis on reproducible science via automated code compilation and testing
- Support for continuous revision of articles, code, and reviews


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The BioImage Suite Datatree Tool: Enabling Flexible Realtime Surgical Visualizations
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This paper describes the Datatree module of BioImage Suite, that allows for rapid and flexible reslicing of images based on a user-defined tree structure that organizes image and transformation data as well as electrode localizations, image landmarks, and [...]

BioImage Suite: An integrated medical image analysis suite: An update
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BioImage Suite is an NIH-supported medical image analysis software suite developed at Yale. It leverages both the Visualization Toolkit (VTK) and the Insight Toolkit (ITK) and it includes many additional algorithms for image analysis especially in the areas [...]

2006 MICCAI Open Workshop Announcement
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The Insight Software Consortium (ISC) and The National Aliance for Medical Image Computing (NA-MIC) are hosting a one-day MICCAI workshop that will feature oral and poster presentations on open-source toolkits and applications as well as freely available [...]

ITK Tutorial Presentation Slides
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This course introduces attendees to select open-source efforts in the field of medical image analysis. Opportunities for users and developers are presented. The course particularly focuses on the open-source Insight Toolkit (ITK) for medical image [...]

A Quantitative DTI Fiber Tract Analysis Suite
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Diffusion tensor imaging (DTI) allows a quantitative study of the underlying geometry and architecture of white matter. We have developed a suite of open source tools for quantitative analysis of DTI suitable for use in clinical research studies. We have [...]

A definition of Spatial Orientation for the Insight Toolkit
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A report on the issue of image orientation with respect to the Insight Toolkit. A description of how orientation is defined in ITK, and the tools available for manipulating and detecting image orientation.

Development of open source software for computer-assisted intervention systems
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We are developing open source software for computer assisted intervention systems. Our primary experience has been with medical robots, but the concepts (and software) apply to many physical devices that interact with the real world. The real-time [...]

A Modification to Otsu Thresholding Method for ICV Segmentation
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A modification is made to Otsu thresholding method. It provides better results for ICV (Intracranial volume) segmentation on one kind of T2-weighted MRI data.

Knowledge-Based Segmentation of Brain MRI Scans Using the Insight Toolkit
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An Insight Toolkit (ITK) implementation of our knowledgebased segmentation algorithm applied to brain MRI scans is presented in this paper. Our algorithm is a refinement of the work of Teo, Saprio, and Wandall. The basic idea is to incorporate prior [...]

OpenTissue - An Open Source Toolkit for Physics-Based Animation
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OpenTissue is a multidisciplinary, open source programming toolkit for physics-based simulation, collision detection, scientific visualization, and medical imaging. The toolkit was initiated in 2001, is driven by academia, and is used by several [...]

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Publication of the Month
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Graph Cuts, Caveat Utilitor, and Euler's Bridges of Konigsberg
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Most Recent Reviews
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Valuable contribution
A new implementation of...
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A Skull-Stripping Filter for ITK
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A useful function, but with some build...
Walk In A Triangulation : Straight Walk
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Implementation of local structure...
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