The Insight Journal is an Open Access on-line publication covering the domain of medical image processing and visualization.

The unique characteristics of the Insight Journal include:

- Open-access to articles, data, code, and reviews
- Open peer-review that invites discussion between reviewers and authors
- Emphasis on reproducible science via automated code compilation and testing
- Support for continuous revision of articles, code, and reviews

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IGSTK: A State Machine Architecture for an Open Source Software Toolkit for Image-Guided Surgery Applications
The Image-Guided Surgery Toolkit (IGSTK) is an Open Source software project being developed under NIH/NIBIB funding. The toolkit will provide a common platform for implementing image-guided surgery applications and for fostering research in the field. The [...]

Collaborative Development of an open framework for medical simulation
This paper investigates an Open Framework for Medical Simulation (named SOFA for Simulation Open Framework Architecture), and proposes ideas for structuring and supporting its expansion. Lately, through a joint effort between the Sim Group at CIMIT and the [...]

ITK-based Registration of Large Images from Light Microscopy: A Biomedical Application
Inactivation of the retinoblastoma gene in mouse embryos results in morphological changes in the placenta, which has been shown to affect fetal survivability. The construction of a 3D virtual placenta aids in accurately quantifying structural changes [...]

BioImage Suite: An integrated medical image analysis suite
BioImage Suite is an integrated image analysis software suite developed at Yale. It uses a combination of C++ and Tcl in the same fashion as that pioneered by the Visualization Toolkit (VTK) and it leverages both VTK and the Insight Toolkit. It has [...]

N-Dimensional Path Optimization:  The Implementation of a Novel Algorithm in ITK
Using the path framework we previously added to ITK, we implemented a novel algorithm for n-dimensional path optimization, which we call the ND Swath (NDS). NDS uses dynamic programming to globally optimize the placement of a path within an image, subject to [...]

Creation and Demonstration of a Framework for Handling Paths in ITK
No opinion
A hierarchy of path data types and basic path filters were added to ITK, providing a general framework for curves that map a scalar value to a point in n-dimensional space. The framework supports curves that are either continuous (parametric curves) or [...]

Camino: Diffusion MRI reconstruction and processing
No opinion
Camino is an open-source, object-oriented software package for processing diffusion MRI data. Camino implements a data processing pipeline, which allows for easy scripting and flexible integration with other software. This paper summarises the features of [...]

Clustering Based Cardiac Resynchronization Therapy Prediction using Open Source Toolkit PRTools
No opinion
We propose a novel framework at MICCAI 2005 to predict pacing sites in the left ventricle (LV) of a heart. This framework can be used to assist pacemaker implantation and programming in cardiac resynchronization therapy (CRT) that is a widely adopted therapy [...]

Impact of motion correction on the quantitative analysis of DCE-MR Images
Dynamic magnetic resonance imaging (DCE-MRI) carried out with contrast media such as Gd-chelate complex (Gd-DTPA) allows the non-invasive assessment of microcirculatory characteristics of malignant lesions. Quantitative estimation of lesion [...]

Unsupervised Segmentation for Myofiber Counting in Immunofluorescent Microscopy Images
No opinion
The gold standard for measuring muscle regeneration in muscular dystrophy therapies is counting the number of dystrophin-positive muscle fibers on a cryostat muscle section immunostained for dystrophin. The standard process of manually counting a few thousand [...]

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Publication of the Month
Boolean Operations on Surfaces in VTK Without External Libraries
by Quammen C., Weigle C., Taylor II R.M.

Issues Accepting Submissions
2017 January-December
75 days

Most Recent Reviews
Worked very well and was easy to build
A Skull-Stripping Filter for ITK
by Jared Becksfort on 2017-09-19 16:03:36
Very interesting work
Isotropic and Steerable Wavelets in N...
by Le Zheng on 2017-06-02 11:07:04
Valuable contribution
A new implementation of...
by Dženan Zukić on 2016-07-28 15:40:50
Simple interface
A Skull-Stripping Filter for ITK
by Todd Jensen on 2016-05-30 08:00:15
A useful function, but with some build...
Walk In A Triangulation : Straight Walk
by Davis Vigneault on 2015-06-09 09:57:49
A meaningful contribution with...
Exact Geometrical Predicate: Point in...
by Davis Vigneault on 2015-06-09 11:10:14
Useful tool for kinetic analysis of PET...
InsightToolkit Kinetic Analysis...
by Matthew Mccormick on 2014-11-21 18:34:13
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