The Insight Journal is an Open Access on-line publication covering the domain of medical image processing and visualization.

The unique characteristics of the Insight Journal include:

- Open-access to articles, data, code, and reviews
- Open peer-review that invites discussion between reviewers and authors
- Emphasis on reproducible science via automated code compilation and testing
- Support for continuous revision of articles, code, and reviews

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Statismo - A framework for PCA based statistical models
No opinion
This paper describes the Statismo framework, which is a framework for PCA based statistical models.Statistical models are used to describe the variability of an object within a population, learned from a set of training samples. Originally developed to model [...]

Fostering Open Science in Lung Cancer Lesion Sizing with ITK module LSTK
This document describes the latest efforts in integrating the Lesion Sizing Toolkit (LSTK) into ITK v4 as an external/remote module providing an Open Science dashboard website with a large open image archive of lung cancer CT images for LSTK development and [...]

Robust Scattered Data Points Approximation Using Finite Element Biomechanical Model
Many enabling technologies like non-rigid registration in medical image computing rely on the construction of a function by interpolating scattered points; however, the outliers contained in the data and the approximation error make the robust and accurate [...]

Mattes’ Mutual Information Metric for Multimodality Registration of DESS and T2 Mapped Knee Articular MR Sequences
No opinion
Registration of multiple MR sequences remains a challenging problem. The Insight Toolkit (ITK) implements the Mattes’ mutual information metric for multimodality registration. Here, example source code, data, and executable files to implement the Mattes’ [...]

Structural MRI Unwarping Using CMTK
No opinion
This document describes the workflow for unwarping structural MR images, in particular T1-weighted SPGR and MP-RAGE scans, using reference scans of the Magphan(R) EMR051 Quantitative Imaging Phantom (a.k.a. ADNI Phantom) and the tools of the Computational [...]

A Skull-Stripping Filter for ITK
Skull-stripping (or brain extraction) is an important pre-processing step in neuroimage analysis. This document describes a skull-stripping filter implemented using the Insight Toolkit ITK, which we named itk::StripTsImageFilter. It is a composite filter [...]

HyperFlow and ITK v4 Integration: Exploring the use of a modern parallel dataflow architecture in ITK
In this document, we report our activities on the subcontract with Kitware where we carefully study the upcoming ITK v4 pipeline design to help the ITK v4 development team to add support of modern dataflow architectures to ITK.

An implementation of TDFFD and LDFFD algorithms
This paper describes the implementation of the LDFFD and TDFFD algorithms. Both quantify motion and deformation from an input image sequence by taking profit of the temporal dimension of velocity fields in the diffeomorphic registration framework to process [...]

Efficient N-Dimensional surface estimation using Crofton formula and run-length encoding
Unlike the measure of the area in 2D or of the volume in 3D, the perimeter and the surface are not easily measurable in a discretized image. In this article we describe a method based on the Crofton formula to measure those two parameters in a discritized [...]

Walk In A Triangulation : Straight Walk
This document describes the implementation in ITK of the Straight Walk in a Triangulation algorithm proposed by Devillers et al. Using the exact discrete geometrical orientation predicate, and the itk::QuadEdgeMesh API of ITK, we propose an efficient [...]

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Browse Journals

Publication of the Month
Introducing Dice, Jaccard, and Other Label Overlap Measures To ITK
by Tustison N., Gee J.

Most Recent Reviews
Valuable contribution
A new implementation of...
by Dženan Zukić on 2016-07-28 15:40:50
Simple interface
A Skull-Stripping Filter for ITK
by Todd Jensen on 2016-05-30 08:00:15
A useful function, but with some build...
Walk In A Triangulation : Straight Walk
by Davis Vigneault on 2015-06-09 09:57:49
A meaningful contribution with...
Exact Geometrical Predicate: Point in...
by Davis Vigneault on 2015-06-09 11:10:14
Useful tool for kinetic analysis of PET...
InsightToolkit Kinetic Analysis...
by Matthew Mccormick on 2014-11-21 18:34:13
Working ITK3 and ITK4 version...
Implementation of local structure...
by Adrienne Mendrik on 2013-12-18 09:54:30
An Open Source, Fast Ultrasound B-Mode...
by Dzyk Mike on 2013-07-07 02:49:36
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