The Insight Journal is an Open Access on-line publication covering the domain of medical image processing and visualization.

The unique characteristics of the Insight Journal include:

- Open-access to articles, data, code, and reviews
- Open peer-review that invites discussion between reviewers and authors
- Emphasis on reproducible science via automated code compilation and testing
- Support for continuous revision of articles, code, and reviews


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Fuzzy Clustering Algorithms for Image Segmentation
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In this document we present the implementation of three fuzzy clustering algorithms using the Insight Toolkit ITK. Firstly, we developed the conventional Fuzzy C-Means that will serve as the basis for the rest of the proposed algorithms. The next algorithms [...]

Multi-scale Steerable Phase-Symmetry Filters for ITK
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We have implemented filters for computing phase symmetry (PS) in ITK using steerable filters computed and applied in the Fourier domain. In some recent publications, phase symmetry has been shown to be a useful pre-processing measure for performing image [...]

Exact Geometrical Predicate: Point in circle
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This document describes the implementation in ITK of the "point in circle" geometrical predicate. Based on Jonathan Shewchuk's work which implements an exact version of the predicate using standard floating point types and arithmetic, the implementation [...]

Why do walks with Hilbert seem to take so long?
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Hilbert curves look pretty sweet which is why I wrote this class. Take a look at the pictures and see for yourself.

Laplace Beltrami Filter on QuadEdge Meshes
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A contribution to the Insight Toolkit intended to support the process of statistical analysis in Computational Anatomy. The methods included here operate on open or closed triagulated surfaces (represented by a QuadEdgeMesh). The filter assigns basis [...]

Simulated Diffusion-Weighted Imaging for the ITK Masses
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A recent article by Van Hecke et al. [3] describes a framework for creating simulated diffusion-weighted images (DWI). The methodology allows for modeling intersubject variability, regional pathology, and noise and is quite useful for evaluation purposes. [...]

Interactive Correspondence Selection
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This document presents a GUI application to manually select corresponding points in two data sets. The data sets can each be either an image or a point cloud. If both data sets are images, the functionality is equivalent to Matlab's 'cpselect' function. There [...]

Small Hole Filling in ITK
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This code provides an implementation of a simple technique to fill small holes in an image. We use a multi-pass method that fills pixels on the border of a hole with the average of its non-hole 8-connected neighbors. This process is repeated until all holes [...]

A Gradient Descent Trust Region Optimizer
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This document describes a new simple gradient descent optimizer which is a potential replacement or supplement for RegularStepGradientDescentOptimizer. The optimizer requires only the gradient of the parameters and uses a simple linear model internally. [...]

Moore Neighbor Tracing
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This document presents an implementation of Moore Neighbor Tracing - an algorithm to find an ordered outline of a blob or contour in an image. An excellent tutorial on Moore Neighbor Tracing is provided [...]

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Publication of the Month
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Boolean Operations on Surfaces in VTK Without External Libraries
by Quammen C., Weigle C., Taylor II R.M.

Issues Accepting Submissions
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2017 January-December
71 days
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Most Recent Reviews
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Worked very well and was easy to build
A Skull-Stripping Filter for ITK
by Jared Becksfort on 2017-09-19 16:03:36
Very interesting work
Isotropic and Steerable Wavelets in N...
by Le Zheng on 2017-06-02 11:07:04
Valuable contribution
A new implementation of...
by Dženan Zukić on 2016-07-28 15:40:50
Simple interface
A Skull-Stripping Filter for ITK
by Todd Jensen on 2016-05-30 08:00:15
A useful function, but with some build...
Walk In A Triangulation : Straight Walk
by Davis Vigneault on 2015-06-09 09:57:49
A meaningful contribution with...
Exact Geometrical Predicate: Point in...
by Davis Vigneault on 2015-06-09 11:10:14
Useful tool for kinetic analysis of PET...
InsightToolkit Kinetic Analysis...
by Matthew Mccormick on 2014-11-21 18:34:13
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