The Use of Robust Local Hausdorff Distances in Accuracy Assessment for Image Alignment of Brain MRI
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We present and implement an error estimation protocol in the Insight Toolkit (ITK) for assessing the accuracy of image alignment. We base this error estimation on a robust version of the HausdorffDistance (HD) metric applied to the recovered edges of the [...]

Tetrahedral mesh generation for medical imaging
We describe the open source implementation of an adaptive tetrahedral mesh generator particularly targeted for non-rigid FEM registration of MR images. While many medical imaging applications require robust mesh generation, there are few codes available. [...]

Parallel N-Dimensional Exact Signed Euclidean Distance Transform
The computation speed for distance transforms becomes important in a wide variety of image processing applications. Current ITK library filters do not see any benefit from a multithreading environment. We introduce a three-dimensional signed parallel [...]

An ITK Implementation of Physics-based Non-rigid Registration Method
As part of the ITK v4 project efforts, we have developed ITK filters for physics-based non-rigid registration (PBNRR), which satisfies the following requirements: account for tissue properties in the registration, improve accuracy compared to rigid [...]

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