Insight Journal

EM Segmentation: Automatic Tissue Class Intensity Initialization Using K-means
Published in The MIDAS Journal

ABSTRACT Brain tissue segmentation is important in many medical image applications. We augmented the Expectation-Maximization segmentation algorithm in Slicer3 (www.spl.harvard.edu) . Currently, in the EM Segmenter module in Slicer3 user input is necessary to [...]

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An ITK Implementation of a Diffusion Tensor Images Resampling Filter

An ITK Implementation of a Diffusion Tensor Images Resampling Filter
Published in The Insight Journal

Budin F., Bouix S., Shenton M., Styner M., Oguz I.

This paper describes the implementation of a resampling ﬁlter for Diffusion Tensor Images (DTI) in the Insight ToolKit (ITK). ITK already contains a ﬁlter for resampling scalar and vector images as well as several transformation and interpolation classes. [...]

downloaded 4087 times, viewed 109 times and 2 reviews.

Framework for the Statistical Shape Analysis of Brain Structures using SPHARM-PDM
Published in The Insight Journal

Styner M., Oguz I., Xu S., Brechbuehler C., Pantazis D., Levitt J.J., Shenton M.E., Gerig G.

Shape analysis has become of increasing interest to the neuroimaging community due to its potential to precisely locate morphological changes between healthy and pathological structures. This manuscript presents a comprehensive set of tools for the [...]

downloaded 3234 times, viewed 144 times and no review.

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