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Unwarping Echo Planar Images Using CMTK
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This document describes the workflow for unwarping echo planar MR images (EPI), in particular diffusion-weighted images, using an acquisition method with reversed phase encoding and the tools of the Computational Morphometry Toolkit (CMTK). This technique [...]

Numerical Q-Ball Image Reconstruction: an ITK Implementation
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This document describes an implementation of David S. Tuch's numerical Q-Ball reconstruction algorithm implemented using the Insight Toolkit ITK (www.itk.org). The document is accompanied with the source code, input data, parameters and output data that were [...]

A new implementation of itk::ImageToImageFilter for efficient parallelization of image processing algorithms using Intel Threading Building Blocks
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Modern medical imaging makes use of high performance computing to accelerate image acquisition, image reconstruction, image visualization and image analysis. Software libraries that provide implementations of key medical imaging algorithms need to efficiently [...]

Brain Tumor Progression Modeling - A Data Driven Approach
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Malignant gliomas are highly heterogeneous brain tumors with complex an- isotropic growth patterns and occult invasion. Computational modeling of cell migration and proliferation has been subject of intensive research aiming at a deeper understanding of the [...]


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