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Probability Distributions for the Insight Toolkit
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Probability distributions are a key component of clinical research. One only has to make a cursory review of clinical literature to realize that nearly all clinical publications reference some sort of statistical test; be it t-test, chi-squared test, or [...]

New Expectation Maximization Segmentation Pipeline in Slicer 3
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Many neuroanatomy studies rely on brain tissue segmentation in Magnetic Resonance images (MRI). The Expectation-Maximization (EM) theory offers a popular framework for this task. We studied the EM algorithm developed at the Surgical Planning Laboratory (SPL) [...]

Numerical Q-Ball Image Reconstruction: an ITK Implementation
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This document describes an implementation of David S. Tuch's numerical Q-Ball reconstruction algorithm implemented using the Insight Toolkit ITK (www.itk.org). The document is accompanied with the source code, input data, parameters and output data that were [...]

Visualization of 4D-PET/CT, Target Volumes and Dose Distribution: Applications in Radiotherapy Planning
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In radiation treatment (RT) planning medical doctors need to consider a variety of information sources for anatomical and functional target volume delineation. The validation and inspection of the defined target volumes and the resulting RT plan is a complex [...]


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