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An ITK Class that Splits Multi-Component Images
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This document describes the implementation of a class for the Insight Toolkit (ITK) that takes an image with multi-component pixels and outputs a scalar image for each component. This can be useful when examining images of vectors, tensors, etc. This filter [...]

The BioImage Suite Datatree Tool: Enabling Flexible Realtime Surgical Visualizations
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This paper describes the Datatree module of BioImage Suite, that allows for rapid and flexible reslicing of images based on a user-defined tree structure that organizes image and transformation data as well as electrode localizations, image landmarks, and [...]

Semi-automatic Segmentation of 3D Liver Tumors from CT Scans Using Voxel Classification and Propagational Learning
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A semi-automatic scheme was developed for the segmentation of 3D liver tumors from computed tomography (CT) images. First a support vector machine (SVM) classifier was trained to extract tumor region from one single 2D slice in the intermediate part of a [...]

Multiple Sclerosis Detection in Multispectral Magnetic Resonance Images with Principal Components Analysis.
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This paper presents a local feature vector based method for automated Multiple Sclerosis (MS) lesion segmentation of multi spectral MRI data. Twenty datasets from MS patients with FLAIR, T1,T2, MD and FA data with expert annotations are available as training [...]


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