The Insight Journal is an Open Access on-line publication covering the domain of medical image processing and visualization.
The unique characteristics of the Insight Journal include:
- Open-access to articles, data, code, and reviews
- Open peer-review that invites discussion between reviewers and authors
- Emphasis on reproducible science via automated code compilation and testing
- Support for continuous revision of articles, code, and reviews
The MICCAI'08 workshops have been moved to the Midas Journal.
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The unique characteristics of the Insight Journal include:
- Open-access to articles, data, code, and reviews
- Open peer-review that invites discussion between reviewers and authors
- Emphasis on reproducible science via automated code compilation and testing
- Support for continuous revision of articles, code, and reviews
The MICCAI'08 workshops have been moved to the Midas Journal. Subscribe to the Kitware's newsletter
to receive news about open-source on your desk, it's free!
An ITK implementation of the Normalized Gradient Field Image to Image Metric
Published in The Insight Journal
Published in The Insight Journal
This article describes the ITK implementation of a Normalized Gradient Fields
based image-to-image metric. Some properties of the metric are discussed and example registrations are presented.
Although the KappaStatisticImageToImageMetric can be used to obtain the Dice metric (or mean overlap), there are other related measurements that are useful for evaluating results derived from various image analysis tasks. These measures include the target [...]
This guide is intended as a very brief introduction of the main tools in the Computational Morphometry Toolkit (CMTK), which is available in source code and as precompiled binaries from http://www.nitrc.org/projects/cmtk/. The target audience of this document [...]
In this submission, we offer the GaussianInterpolationImageFunction which adds to the growing collection of existing interpolation algorithms in ITK for resampling scalar images such as the LinearInterpolateImageFunction, BSplineInterpolateImageFunction, and [...]
An Implementation of Parallel Fast Marching Using the Message Passing Interface
Published in The Insight Journal
Published in The Insight Journal
This document introduces a program based on the algorithm described by Maria Cristina Tugurlan. The program uses file readers, image filters, and file writers from the Insight Toolkit ITK www.itk.org. It produces as output an image whose values are the times [...]
An Insight Toolkit (ITK) algorithm for adaptively thresholding images is presented in this paper. Currently, the usage of thresholding methods in ITK has made use of global thresholds, confidence connected thresholds and neighborhood strategies. The current [...]
This paper presents parsing software for importing contours from DICOM RT structure set files into binary image files. This is a common requirement for transferring expert manual segmentations from radiotherapy treatment planning software into external image [...]
We describe a new class itk::DicomDirectoryToImage which, given a directory consisting of raw dicom files, converts all found series to volumetric data with consistent filenaming based on the dicom headers. In addition various internal checks on the dicom [...]
An Optimized N-Dimensional Hough Filter for Detecting Spherical Image Objects
Published in The Insight Journal
Published in The Insight Journal
An Insight Toolkit (ITK) algorithm for detection of spherical objects using Hough methods with voting is presented in this paper. Currently, the usage of Hough methods for detecting linear and circular elements exists for 2D images in ITK. The current work [...]
Many neuroanatomy studies rely on brain tissue segmentation in Magnetic Resonance images (MRI). The Expectation-Maximization (EM) theory offers a popular framework for this task. We studied the EM algorithm developed at the Surgical Planning Laboratory (SPL) [...]
Gross shape measures such as volume have been widely used in statistical analysis of anatomical structures. Statistical shape analysis methods have emerged within the last decade to allow for a localized analysis of shape. Most shape analysis frameworks are [...]
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Journals
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Publication of the Month
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| Non-rigid Groupwise Registration using B-Spline Deformation Model
by Balci S.K., Golland P., Wells W.M.
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Issues Accepting Submissions
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| 2010 January-June 141 days |
| 2010 January - December Submissions 325 days |
| Medical Imaging and Computing 7129 days |
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Most Recent Reviews
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| LookAt Transform Review LookAt Transform Initializer and... by Navneeth Subramanian on 2009-10-13 07:57:54
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| Worth trying on our data Local Shape Analysis using MANCOVA by Donna Dierker on 2009-10-26 11:11:28
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| supplied source code won't compile,... DicomImport by Kent Williams on 2009-10-21 12:41:21
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| Simple graph cuts are not demonstrated. Graph Cuts, Caveat Utilitor, and... by David Doria on 2009-09-14 09:45:34
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| A useful tool for brain MRI analysis BRAINSFit: Mutual Information... by Andriy Fedorov on 2009-07-31 09:11:47
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| Nice practical contribution requiring... ... by Tom Vercauteren on 2009-07-24 07:45:57
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